Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm8762-201ENSMUST00000193486 339 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox1P53783 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox1P53783 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Gm18212-201ENSMUST00000211678 889 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Sox1P53783 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox1P53783 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.18□□□□□ -0.14
Sox1P53783 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 App-207ENSMUST00000227737 2827 ntBASIC14.18□□□□□ -0.14
Sox1P53783 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.18□□□□□ -0.14
Sox1P53783 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox1P53783 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.18□□□□□ -0.14
Sox1P53783 Gm44100-201ENSMUST00000204329 436 ntBASIC14.18□□□□□ -0.14
Sox1P53783 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.18□□□□□ -0.14
Sox1P53783 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox1P53783 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox1P53783 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox1P53783 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox1P53783 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox1P53783 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox1P53783 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Sox1P53783 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sox1P53783 Gm12616-201ENSMUST00000118594 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox1P53783 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Gm25732-201ENSMUST00000175168 60 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12624-201ENSMUST00000177615 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12621-201ENSMUST00000177760 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12615-201ENSMUST00000177970 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12622-201ENSMUST00000177975 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12627-201ENSMUST00000178412 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12625-201ENSMUST00000179122 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12614-201ENSMUST00000179586 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm12613-201ENSMUST00000180323 382 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Gm42550-201ENSMUST00000201553 960 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox1P53783 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.17□□□□□ -0.14
Sox1P53783 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms