Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.27□□□□□ -0.12
ClgnP52194 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClgnP52194 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ClgnP52194 Gm12882-201ENSMUST00000121696 517 ntBASIC14.27□□□□□ -0.13
ClgnP52194 Gm27702-201ENSMUST00000184512 56 ntBASIC14.27□□□□□ -0.13
ClgnP52194 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.27□□□□□ -0.13
ClgnP52194 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.27□□□□□ -0.13
ClgnP52194 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.27□□□□□ -0.13
ClgnP52194 Gm8396-201ENSMUST00000057361 823 ntBASIC14.27□□□□□ -0.13
ClgnP52194 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
ClgnP52194 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClgnP52194 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ClgnP52194 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ClgnP52194 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
ClgnP52194 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ClgnP52194 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.26□□□□□ -0.13
ClgnP52194 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.26□□□□□ -0.13
ClgnP52194 Gm24158-201ENSMUST00000175263 71 ntBASIC14.26□□□□□ -0.13
ClgnP52194 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.26□□□□□ -0.13
ClgnP52194 Gm10253-201ENSMUST00000194270 940 ntBASIC14.26□□□□□ -0.13
ClgnP52194 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.26□□□□□ -0.13
ClgnP52194 AA619741-201ENSMUST00000195095 646 ntBASIC14.26□□□□□ -0.13
ClgnP52194 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.26□□□□□ -0.13
ClgnP52194 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.26□□□□□ -0.13
ClgnP52194 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ClgnP52194 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClgnP52194 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
ClgnP52194 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.25□□□□□ -0.13
ClgnP52194 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.25□□□□□ -0.13
ClgnP52194 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Gm43474-201ENSMUST00000196415 774 ntBASIC14.25□□□□□ -0.13
ClgnP52194 Gm5312-201ENSMUST00000203728 547 ntBASIC14.25□□□□□ -0.13
ClgnP52194 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.25□□□□□ -0.13
ClgnP52194 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ClgnP52194 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.25□□□□□ -0.13
ClgnP52194 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClgnP52194 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClgnP52194 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms