Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox18P43680 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox18P43680 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.41□□□□□ -0.26
Sox18P43680 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.41□□□□□ -0.26
Sox18P43680 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox18P43680 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox18P43680 Gm38266-201ENSMUST00000194931 421 ntBASIC13.41□□□□□ -0.26
Sox18P43680 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Gm10012-201ENSMUST00000078252 192 ntBASIC13.41□□□□□ -0.26
Sox18P43680 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox18P43680 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox18P43680 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.4□□□□□ -0.26
Sox18P43680 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.4□□□□□ -0.26
Sox18P43680 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Sox18P43680 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.4□□□□□ -0.26
Sox18P43680 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox18P43680 Mir8109-201ENSMUST00000184375 117 ntBASIC13.4□□□□□ -0.26
Sox18P43680 Gm18753-201ENSMUST00000201000 566 ntBASIC13.4□□□□□ -0.26
Sox18P43680 Gm45880-201ENSMUST00000213041 853 ntBASIC13.4□□□□□ -0.26
Sox18P43680 AC154828.2-201ENSMUST00000220908 1070 ntBASIC13.4□□□□□ -0.26
Sox18P43680 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox18P43680 Gm24526-201ENSMUST00000082921 158 ntBASIC13.4□□□□□ -0.26
Sox18P43680 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Sox18P43680 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox18P43680 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Sox18P43680 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox18P43680 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox18P43680 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox18P43680 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.39□□□□□ -0.27
Sox18P43680 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox18P43680 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox18P43680 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox18P43680 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox18P43680 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Gm24644-201ENSMUST00000157114 139 ntBASIC13.39□□□□□ -0.27
Sox18P43680 Gm16107-201ENSMUST00000162523 862 ntBASIC13.39□□□□□ -0.27
Sox18P43680 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox18P43680 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Gm28877-201ENSMUST00000191349 604 ntBASIC13.39□□□□□ -0.27
Sox18P43680 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox18P43680 Gm43818-201ENSMUST00000200605 466 ntBASIC13.39□□□□□ -0.27
Sox18P43680 Gm7783-201ENSMUST00000204795 781 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms