Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.8□□□□□ -0.36
Nkx2-2P42586 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.8□□□□□ -0.36
Nkx2-2P42586 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.8□□□□□ -0.36
Nkx2-2P42586 Gm4875-201ENSMUST00000118257 786 ntBASIC12.8□□□□□ -0.36
Nkx2-2P42586 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Gm5425-201ENSMUST00000214125 459 ntBASIC12.8□□□□□ -0.36
Nkx2-2P42586 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.8□□□□□ -0.36
Nkx2-2P42586 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-2P42586 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gm44719-201ENSMUST00000206404 149 ntBASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-2P42586 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.78□□□□□ -0.36
Nkx2-2P42586 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.78□□□□□ -0.36
Nkx2-2P42586 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.78□□□□□ -0.36
Nkx2-2P42586 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nkx2-2P42586 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-2P42586 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.78□□□□□ -0.36
Nkx2-2P42586 Gm13385-201ENSMUST00000121089 220 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms