Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh4P39038 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh4P39038 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh4P39038 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdh4P39038 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdh4P39038 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh4P39038 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdh4P39038 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdh4P39038 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdh4P39038 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdh4P39038 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdh4P39038 Gm4875-201ENSMUST00000118257 786 ntBASIC13.38□□□□□ -0.27
Cdh4P39038 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.38□□□□□ -0.27
Cdh4P39038 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdh4P39038 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdh4P39038 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdh4P39038 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdh4P39038 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.38□□□□□ -0.27
Cdh4P39038 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdh4P39038 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdh4P39038 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.38□□□□□ -0.27
Cdh4P39038 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdh4P39038 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cdh4P39038 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdh4P39038 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Gm12585-201ENSMUST00000117307 290 ntBASIC13.37□□□□□ -0.27
Cdh4P39038 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdh4P39038 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.37□□□□□ -0.27
Cdh4P39038 Gm18027-201ENSMUST00000218947 619 ntBASIC13.37□□□□□ -0.27
Cdh4P39038 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdh4P39038 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cdh4P39038 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdh4P39038 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh4P39038 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdh4P39038 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh4P39038 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh4P39038 Gm15487-201ENSMUST00000122373 465 ntBASIC13.36□□□□□ -0.27
Cdh4P39038 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdh4P39038 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cdh4P39038 Gm8584-201ENSMUST00000171982 758 ntBASIC13.36□□□□□ -0.27
Cdh4P39038 Gm27838-201ENSMUST00000184829 128 ntBASIC13.36□□□□□ -0.27
Cdh4P39038 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh4P39038 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdh4P39038 Gm37714-201ENSMUST00000194742 342 ntBASIC13.36□□□□□ -0.27
Cdh4P39038 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.36□□□□□ -0.27
Cdh4P39038 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdh4P39038 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdh4P39038 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Cdh4P39038 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdh4P39038 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.36□□□□□ -0.27
Cdh4P39038 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdh4P39038 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms