Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs1P35441 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs1P35441 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs1P35441 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs1P35441 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thbs1P35441 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Thbs1P35441 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Thbs1P35441 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.93□□□□□ -0.34
Thbs1P35441 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.93□□□□□ -0.34
Thbs1P35441 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Thbs1P35441 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.93□□□□□ -0.34
Thbs1P35441 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.93□□□□□ -0.34
Thbs1P35441 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.93□□□□□ -0.34
Thbs1P35441 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.93□□□□□ -0.34
Thbs1P35441 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.93□□□□□ -0.34
Thbs1P35441 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Thbs1P35441 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Thbs1P35441 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Thbs1P35441 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Thbs1P35441 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thbs1P35441 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Thbs1P35441 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Gm14716-201ENSMUST00000120138 718 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Gm15693-201ENSMUST00000120470 637 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.92□□□□□ -0.34
Thbs1P35441 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.92□□□□□ -0.34
Thbs1P35441 Gm37714-201ENSMUST00000194742 342 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.92□□□□□ -0.34
Thbs1P35441 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Thbs1P35441 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Thbs1P35441 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thbs1P35441 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Thbs1P35441 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.91□□□□□ -0.34
Thbs1P35441 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.91□□□□□ -0.34
Thbs1P35441 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Thbs1P35441 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.91□□□□□ -0.34
Thbs1P35441 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Gm24543-201ENSMUST00000103867 82 ntBASIC12.91□□□□□ -0.34
Thbs1P35441 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Gm29741-201ENSMUST00000192667 421 ntBASIC12.91□□□□□ -0.34
Thbs1P35441 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.91□□□□□ -0.34
Thbs1P35441 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.91□□□□□ -0.34
Thbs1P35441 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms