Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm25287-201ENSMUST00000103846 110 ntBASIC14.3□□□□□ -0.12
Mmp13P33435 Gm22918-201ENSMUST00000103855 110 ntBASIC14.3□□□□□ -0.12
Mmp13P33435 Mir449b-201ENSMUST00000104833 80 ntBASIC14.3□□□□□ -0.12
Mmp13P33435 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Gm13616-201ENSMUST00000120600 222 ntBASIC14.3□□□□□ -0.12
Mmp13P33435 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Mmp13P33435 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Gm25948-201ENSMUST00000175334 112 ntBASIC14.3□□□□□ -0.12
Mmp13P33435 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.3□□□□□ -0.12
Mmp13P33435 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.3□□□□□ -0.12
Mmp13P33435 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Mmp13P33435 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Mmp13P33435 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.3□□□□□ -0.12
Mmp13P33435 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.3□□□□□ -0.12
Mmp13P33435 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.29□□□□□ -0.12
Mmp13P33435 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Gm22065-201ENSMUST00000103753 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm22066-201ENSMUST00000103761 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24932-201ENSMUST00000103763 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24115-201ENSMUST00000103799 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm22190-201ENSMUST00000103827 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm22191-201ENSMUST00000103831 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24721-201ENSMUST00000103849 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm28018-201ENSMUST00000103869 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm26399-201ENSMUST00000103937 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mmp13P33435 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Gm25349-201ENSMUST00000177728 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm23616-201ENSMUST00000177797 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm25871-201ENSMUST00000177816 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24752-201ENSMUST00000178240 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24496-201ENSMUST00000178287 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm25649-201ENSMUST00000178476 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm25548-201ENSMUST00000178681 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm23147-201ENSMUST00000178841 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm26095-201ENSMUST00000179270 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm22171-201ENSMUST00000179283 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm23936-201ENSMUST00000179354 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm22619-201ENSMUST00000179516 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm25255-201ENSMUST00000179579 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24755-201ENSMUST00000179691 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm26506-201ENSMUST00000179692 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm25086-201ENSMUST00000179931 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm23243-201ENSMUST00000180047 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24659-201ENSMUST00000180212 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm24169-201ENSMUST00000180244 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm23689-201ENSMUST00000180354 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm27359-201ENSMUST00000184153 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm27785-201ENSMUST00000184268 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm27466-201ENSMUST00000184396 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm27703-201ENSMUST00000184836 110 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Mmp13P33435 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mmp13P33435 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.29□□□□□ -0.12
Mmp13P33435 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp13P33435 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Mmp13P33435 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Grk6-205ENSMUST00000224653 2976 ntBASIC14.28□□□□□ -0.12
Mmp13P33435 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms