Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rom1P32958 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rom1P32958 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rom1P32958 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rom1P32958 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.04□□□□□ -0.64
Rom1P32958 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.04□□□□□ -0.64
Rom1P32958 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rom1P32958 Gm4899-201ENSMUST00000178708 719 ntBASIC11.04□□□□□ -0.64
Rom1P32958 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.04□□□□□ -0.64
Rom1P32958 Gm7977-201ENSMUST00000193787 748 ntBASIC11.04□□□□□ -0.64
Rom1P32958 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.04□□□□□ -0.64
Rom1P32958 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rom1P32958 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Rom1P32958 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rom1P32958 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Rom1P32958 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rom1P32958 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rom1P32958 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.03□□□□□ -0.64
Rom1P32958 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.03□□□□□ -0.64
Rom1P32958 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.03□□□□□ -0.64
Rom1P32958 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.03□□□□□ -0.64
Rom1P32958 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.03□□□□□ -0.64
Rom1P32958 Gm7230-201ENSMUST00000173026 815 ntBASIC11.03□□□□□ -0.64
Rom1P32958 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Rom1P32958 Gm6550-201ENSMUST00000187574 993 ntBASIC11.03□□□□□ -0.64
Rom1P32958 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.03□□□□□ -0.64
Rom1P32958 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rom1P32958 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rom1P32958 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.03□□□□□ -0.64
Rom1P32958 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rom1P32958 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rom1P32958 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rom1P32958 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rom1P32958 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rom1P32958 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rom1P32958 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Rom1P32958 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rom1P32958 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Rom1P32958 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.02□□□□□ -0.64
Rom1P32958 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Rom1P32958 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rom1P32958 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms