Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm12882-201ENSMUST00000121696 517 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm29310-201ENSMUST00000185468 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21825-201ENSMUST00000185728 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm29109-201ENSMUST00000185895 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21896-201ENSMUST00000186520 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21873-201ENSMUST00000186728 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21794-201ENSMUST00000187056 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21880-201ENSMUST00000187275 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21826-201ENSMUST00000187451 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21198-201ENSMUST00000188393 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21749-201ENSMUST00000189343 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21901-201ENSMUST00000189568 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm29424-201ENSMUST00000189716 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm28599-201ENSMUST00000189838 694 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21867-201ENSMUST00000189917 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm29269-201ENSMUST00000190087 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21722-201ENSMUST00000190153 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm28423-201ENSMUST00000190701 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21899-201ENSMUST00000190745 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21910-201ENSMUST00000191163 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21849-201ENSMUST00000191571 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm28678-201ENSMUST00000191593 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm20910-201ENSMUST00000193268 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm21871-201ENSMUST00000194621 696 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc5P32043 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.97□□□□□ -0.33
Hoxc5P32043 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Hoxc5P32043 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Hoxc5P32043 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.97□□□□□ -0.33
Hoxc5P32043 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc5P32043 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.96□□□□□ -0.33
Hoxc5P32043 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Gm13015-201ENSMUST00000118674 204 ntBASIC12.96□□□□□ -0.33
Hoxc5P32043 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.96□□□□□ -0.33
Hoxc5P32043 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.96□□□□□ -0.33
Hoxc5P32043 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.96□□□□□ -0.33
Hoxc5P32043 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc5P32043 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc5P32043 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.96□□□□□ -0.34
Hoxc5P32043 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.96□□□□□ -0.34
Hoxc5P32043 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc5P32043 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.96□□□□□ -0.34
Hoxc5P32043 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc5P32043 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc5P32043 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms