Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.9□□□□□ -0.18
PdgfbP31240 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.9□□□□□ -0.18
PdgfbP31240 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.9□□□□□ -0.18
PdgfbP31240 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.9□□□□□ -0.18
PdgfbP31240 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Gm2991-201ENSMUST00000173338 480 ntBASIC13.9□□□□□ -0.18
PdgfbP31240 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Gm26927-201ENSMUST00000182385 965 ntBASIC13.9□□□□□ -0.18
PdgfbP31240 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.9□□□□□ -0.18
PdgfbP31240 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PdgfbP31240 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PdgfbP31240 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PdgfbP31240 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PdgfbP31240 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.9□□□□□ -0.18
PdgfbP31240 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
PdgfbP31240 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.19
PdgfbP31240 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.89□□□□□ -0.19
PdgfbP31240 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Gm13786-201ENSMUST00000122371 333 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Gm27320-201ENSMUST00000184892 109 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 Gm37497-201ENSMUST00000195830 798 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.89□□□□□ -0.19
PdgfbP31240 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Gm8227-201ENSMUST00000223306 571 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
PdgfbP31240 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.89□□□□□ -0.19
PdgfbP31240 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PdgfbP31240 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PdgfbP31240 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PdgfbP31240 Mir698-201ENSMUST00000102164 109 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.88□□□□□ -0.19
PdgfbP31240 Gm15370-201ENSMUST00000117158 253 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.88□□□□□ -0.19
PdgfbP31240 Gm2383-201ENSMUST00000181461 807 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Gm6621-201ENSMUST00000193251 772 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Gm38158-201ENSMUST00000194617 339 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Gm6082-201ENSMUST00000215204 454 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PdgfbP31240 Gm10146-201ENSMUST00000072739 309 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.88□□□□□ -0.19
PdgfbP31240 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PdgfbP31240 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PdgfbP31240 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms