Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Nedd8P29595 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.88□□□□□ -0.35
Nedd8P29595 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.88□□□□□ -0.35
Nedd8P29595 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Gm18489-201ENSMUST00000172565 551 ntBASIC12.88□□□□□ -0.35
Nedd8P29595 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.88□□□□□ -0.35
Nedd8P29595 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nedd8P29595 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Nedd8P29595 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nedd8P29595 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Nedd8P29595 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.88□□□□□ -0.35
Nedd8P29595 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.87□□□□□ -0.35
Nedd8P29595 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.87□□□□□ -0.35
Nedd8P29595 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Rubie-203ENSMUST00000227803 2430 ntBASIC12.87□□□□□ -0.35
Nedd8P29595 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.87□□□□□ -0.35
Nedd8P29595 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.87□□□□□ -0.35
Nedd8P29595 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nedd8P29595 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nedd8P29595 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nedd8P29595 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nedd8P29595 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nedd8P29595 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.86□□□□□ -0.35
Nedd8P29595 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Nedd8P29595 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nedd8P29595 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nedd8P29595 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nedd8P29595 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nedd8P29595 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nedd8P29595 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Nedd8P29595 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nedd8P29595 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.85□□□□□ -0.35
Nedd8P29595 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms