Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.97■□□□□ 0.15
Vcam1P29533 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.97■□□□□ 0.15
Vcam1P29533 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vcam1P29533 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Vcam1P29533 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcam1P29533 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.97■□□□□ 0.15
Vcam1P29533 Gm17330-201ENSMUST00000221047 165 ntBASIC15.97■□□□□ 0.15
Vcam1P29533 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.97■□□□□ 0.15
Vcam1P29533 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcam1P29533 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vcam1P29533 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
Vcam1P29533 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcam1P29533 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vcam1P29533 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vcam1P29533 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vcam1P29533 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.97■□□□□ 0.15
Vcam1P29533 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vcam1P29533 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vcam1P29533 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Vcam1P29533 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.96■□□□□ 0.15
Vcam1P29533 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Gm5687-201ENSMUST00000118252 640 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm12403-201ENSMUST00000121384 959 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.96■□□□□ 0.15
Vcam1P29533 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Gm6152-201ENSMUST00000151704 340 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Proscos-202ENSMUST00000178990 666 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.96■□□□□ 0.15
Vcam1P29533 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.96■□□□□ 0.15
Vcam1P29533 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.96■□□□□ 0.15
Vcam1P29533 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.96■□□□□ 0.15
Vcam1P29533 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vcam1P29533 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vcam1P29533 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vcam1P29533 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vcam1P29533 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
Vcam1P29533 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Vcam1P29533 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Gm24644-201ENSMUST00000157114 139 ntBASIC15.95■□□□□ 0.14
Vcam1P29533 Mir1938-201ENSMUST00000158746 100 ntBASIC15.95■□□□□ 0.14
Vcam1P29533 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Gm27731-201ENSMUST00000185192 107 ntBASIC15.95■□□□□ 0.14
Vcam1P29533 Gm29649-201ENSMUST00000185649 419 ntBASIC15.95■□□□□ 0.14
Vcam1P29533 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.95■□□□□ 0.14
Vcam1P29533 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.95■□□□□ 0.14
Vcam1P29533 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.95■□□□□ 0.14
Vcam1P29533 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vcam1P29533 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcam1P29533 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.94■□□□□ 0.14
Vcam1P29533 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vcam1P29533 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcam1P29533 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vcam1P29533 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcam1P29533 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcam1P29533 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vcam1P29533 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vcam1P29533 Gm12742-201ENSMUST00000117326 410 ntBASIC15.94■□□□□ 0.14
Vcam1P29533 Gm15770-201ENSMUST00000117498 584 ntBASIC15.94■□□□□ 0.14
Vcam1P29533 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.94■□□□□ 0.14
Vcam1P29533 Snora78-201ENSMUST00000158630 128 ntBASIC15.94■□□□□ 0.14
Vcam1P29533 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms