Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nfkb1P25799 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Gm11478-201ENSMUST00000117851 599 ntBASIC14.34□□□□□ -0.11
Nfkb1P25799 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.34□□□□□ -0.11
Nfkb1P25799 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Nfkb1P25799 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nfkb1P25799 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nfkb1P25799 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nfkb1P25799 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nfkb1P25799 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nfkb1P25799 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nfkb1P25799 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.33□□□□□ -0.12
Nfkb1P25799 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.33□□□□□ -0.12
Nfkb1P25799 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Gm15240-201ENSMUST00000118156 720 ntBASIC14.33□□□□□ -0.12
Nfkb1P25799 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.33□□□□□ -0.12
Nfkb1P25799 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.33□□□□□ -0.12
Nfkb1P25799 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.33□□□□□ -0.12
Nfkb1P25799 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.33□□□□□ -0.12
Nfkb1P25799 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nfkb1P25799 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.32□□□□□ -0.12
Nfkb1P25799 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms