Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Gm27838-201ENSMUST00000184829 128 ntBASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1bP25119 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Gm14719-201ENSMUST00000121891 340 ntBASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1bP25119 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1bP25119 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms