Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.06■□□□□ 0
Irf8P23611 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Irf8P23611 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.06■□□□□ 0
Irf8P23611 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.06■□□□□ 0
Irf8P23611 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.06■□□□□ 0
Irf8P23611 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.06■□□□□ 0
Irf8P23611 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.06■□□□□ 0
Irf8P23611 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Irf8P23611 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Irf8P23611 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Irf8P23611 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.05■□□□□ 0
Irf8P23611 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Irf8P23611 Gm15321-201ENSMUST00000121290 288 ntBASIC15.05■□□□□ -0
Irf8P23611 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.05■□□□□ -0
Irf8P23611 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.05■□□□□ -0
Irf8P23611 Gm18905-201ENSMUST00000205454 928 ntBASIC15.05■□□□□ -0
Irf8P23611 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.05■□□□□ -0
Irf8P23611 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.05■□□□□ -0
Irf8P23611 Syt7-204ENSMUST00000223586 1344 ntBASIC15.05■□□□□ -0
Irf8P23611 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.05■□□□□ -0
Irf8P23611 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.05■□□□□ -0
Irf8P23611 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.05■□□□□ -0
Irf8P23611 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.05■□□□□ -0
Irf8P23611 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Irf8P23611 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Irf8P23611 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.04■□□□□ -0
Irf8P23611 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.04■□□□□ -0
Irf8P23611 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Irf8P23611 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.04■□□□□ -0
Irf8P23611 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.04■□□□□ -0
Irf8P23611 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.04■□□□□ -0
Irf8P23611 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.04■□□□□ -0
Irf8P23611 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.04■□□□□ -0
Irf8P23611 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Irf8P23611 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.03■□□□□ -0
Irf8P23611 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.03■□□□□ -0
Irf8P23611 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.03■□□□□ -0
Irf8P23611 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.03■□□□□ -0
Irf8P23611 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Irf8P23611 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.03■□□□□ -0
Irf8P23611 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.03■□□□□ -0
Irf8P23611 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Irf8P23611 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.03■□□□□ -0
Irf8P23611 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Irf8P23611 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms