Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.43□□□□□ -0.42
P20040 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P20040 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.43□□□□□ -0.42
P20040 Gm24158-201ENSMUST00000175263 71 ntBASIC12.43□□□□□ -0.42
P20040 Gm38225-201ENSMUST00000194001 393 ntBASIC12.43□□□□□ -0.42
P20040 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.43□□□□□ -0.42
P20040 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.43□□□□□ -0.42
P20040 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
P20040 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.43□□□□□ -0.42
P20040 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P20040 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P20040 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.43□□□□□ -0.42
P20040 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P20040 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P20040 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.42□□□□□ -0.42
P20040 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.42□□□□□ -0.42
P20040 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P20040 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.42□□□□□ -0.42
P20040 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
P20040 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.42□□□□□ -0.42
P20040 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.42□□□□□ -0.42
P20040 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Gm22065-201ENSMUST00000103753 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm22066-201ENSMUST00000103761 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24932-201ENSMUST00000103763 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24115-201ENSMUST00000103799 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm22190-201ENSMUST00000103827 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm22191-201ENSMUST00000103831 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24721-201ENSMUST00000103849 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm28018-201ENSMUST00000103869 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm26399-201ENSMUST00000103937 110 ntBASIC12.42□□□□□ -0.42
P20040 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
P20040 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.42□□□□□ -0.42
P20040 Gm25349-201ENSMUST00000177728 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm23616-201ENSMUST00000177797 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm25871-201ENSMUST00000177816 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24752-201ENSMUST00000178240 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24496-201ENSMUST00000178287 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm25649-201ENSMUST00000178476 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm25548-201ENSMUST00000178681 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm23147-201ENSMUST00000178841 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm26095-201ENSMUST00000179270 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm22171-201ENSMUST00000179283 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm23936-201ENSMUST00000179354 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm22619-201ENSMUST00000179516 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm25255-201ENSMUST00000179579 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24755-201ENSMUST00000179691 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm26506-201ENSMUST00000179692 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm25086-201ENSMUST00000179931 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm23243-201ENSMUST00000180047 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24659-201ENSMUST00000180212 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm24169-201ENSMUST00000180244 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm23689-201ENSMUST00000180354 110 ntBASIC12.42□□□□□ -0.42
P20040 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.42□□□□□ -0.42
P20040 Gm27359-201ENSMUST00000184153 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm27785-201ENSMUST00000184268 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm27466-201ENSMUST00000184396 110 ntBASIC12.42□□□□□ -0.42
P20040 Gm27703-201ENSMUST00000184836 110 ntBASIC12.42□□□□□ -0.42
P20040 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P20040 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.42□□□□□ -0.42
P20040 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
P20040 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P20040 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
P20040 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P20040 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms