Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rb1P13405 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rb1P13405 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rb1P13405 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rb1P13405 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rb1P13405 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rb1P13405 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rb1P13405 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rb1P13405 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.33□□□□□ -0.12
Rb1P13405 Gm14928-201ENSMUST00000120198 477 ntBASIC14.33□□□□□ -0.12
Rb1P13405 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.33□□□□□ -0.12
Rb1P13405 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.33□□□□□ -0.12
Rb1P13405 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.33□□□□□ -0.12
Rb1P13405 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.33□□□□□ -0.12
Rb1P13405 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.33□□□□□ -0.12
Rb1P13405 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rb1P13405 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Celf4-206ENSMUST00000224553 1729 ntBASIC14.32□□□□□ -0.12
Rb1P13405 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.32□□□□□ -0.12
Rb1P13405 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rb1P13405 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Rb1P13405 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.32□□□□□ -0.12
Rb1P13405 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.32□□□□□ -0.12
Rb1P13405 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rb1P13405 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.32□□□□□ -0.12
Rb1P13405 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Rb1P13405 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.32□□□□□ -0.12
Rb1P13405 Gm6218-201ENSMUST00000219812 628 ntBASIC14.32□□□□□ -0.12
Rb1P13405 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rb1P13405 Gm20445-201ENSMUST00000061905 565 ntBASIC14.32□□□□□ -0.12
Rb1P13405 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rb1P13405 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rb1P13405 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rb1P13405 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rb1P13405 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms