Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccl3P10855 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm16177-201ENSMUST00000120728 718 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Gm27514-201ENSMUST00000183692 110 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm43179-201ENSMUST00000198797 275 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccl3P10855 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm24447-201ENSMUST00000083977 338 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.28□□□□□ -0.44
Ccl3P10855 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl3P10855 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl3P10855 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccl3P10855 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl3P10855 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl3P10855 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl3P10855 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ccl3P10855 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl3P10855 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Proscos-202ENSMUST00000178990 666 ntBASIC12.27□□□□□ -0.45
Ccl3P10855 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Ccl3P10855 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccl3P10855 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl3P10855 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Ccl3P10855 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl3P10855 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccl3P10855 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccl3P10855 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccl3P10855 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ccl3P10855 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Gm7399-201ENSMUST00000032395 858 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms