Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NclP09405 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NclP09405 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NclP09405 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC20.68■□□□□ 0.9
NclP09405 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NclP09405 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC20.68■□□□□ 0.9
NclP09405 Gm9002-201ENSMUST00000178437 499 ntBASIC20.68■□□□□ 0.9
NclP09405 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC20.68■□□□□ 0.9
NclP09405 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC20.68■□□□□ 0.9
NclP09405 AC162801.1-201ENSMUST00000220612 198 ntBASIC20.68■□□□□ 0.9
NclP09405 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NclP09405 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NclP09405 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC20.67■□□□□ 0.9
NclP09405 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NclP09405 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Gm15678-201ENSMUST00000117573 960 ntBASIC20.67■□□□□ 0.9
NclP09405 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC20.67■□□□□ 0.9
NclP09405 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NclP09405 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Gm37748-201ENSMUST00000194379 1140 ntBASIC20.67■□□□□ 0.9
NclP09405 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 AC155252.1-201ENSMUST00000226462 1208 ntBASIC20.67■□□□□ 0.9
NclP09405 AC149294.4-201ENSMUST00000227870 882 ntBASIC20.67■□□□□ 0.9
NclP09405 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.67■□□□□ 0.9
NclP09405 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NclP09405 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NclP09405 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
NclP09405 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NclP09405 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NclP09405 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NclP09405 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Gm12960-201ENSMUST00000120017 1066 ntBASIC20.66■□□□□ 0.9
NclP09405 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NclP09405 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.66■□□□□ 0.9
NclP09405 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC20.66■□□□□ 0.9
NclP09405 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NclP09405 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NclP09405 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
NclP09405 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC20.66■□□□□ 0.9
NclP09405 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Nupl1-207ENSMUST00000225311 2475 ntBASIC20.65■□□□□ 0.9
NclP09405 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.65■□□□□ 0.9
NclP09405 AC159196.2-201ENSMUST00000224082 1622 ntBASIC20.65■□□□□ 0.9
NclP09405 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NclP09405 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
NclP09405 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC20.65■□□□□ 0.9
NclP09405 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Gm43094-201ENSMUST00000196549 921 ntBASIC20.65■□□□□ 0.9
NclP09405 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NclP09405 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC20.65■□□□□ 0.9
NclP09405 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms