Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.8□□□□□ -0.04
TnfP06804 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
TnfP06804 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TnfP06804 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Gm11524-201ENSMUST00000119349 807 ntBASIC14.79□□□□□ -0.04
TnfP06804 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Gm27772-201ENSMUST00000184900 187 ntBASIC14.79□□□□□ -0.04
TnfP06804 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
TnfP06804 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TnfP06804 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.79□□□□□ -0.04
TnfP06804 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TnfP06804 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TnfP06804 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TnfP06804 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.78□□□□□ -0.04
TnfP06804 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.78□□□□□ -0.04
TnfP06804 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TnfP06804 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.78□□□□□ -0.04
TnfP06804 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.78□□□□□ -0.04
TnfP06804 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.78□□□□□ -0.04
TnfP06804 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.78□□□□□ -0.04
TnfP06804 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.78□□□□□ -0.04
TnfP06804 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TnfP06804 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TnfP06804 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.78□□□□□ -0.04
TnfP06804 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TnfP06804 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.77□□□□□ -0.04
TnfP06804 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.77□□□□□ -0.04
TnfP06804 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TnfP06804 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
TnfP06804 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TnfP06804 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TnfP06804 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.77□□□□□ -0.05
TnfP06804 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
TnfP06804 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.77□□□□□ -0.05
TnfP06804 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.77□□□□□ -0.05
TnfP06804 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TnfP06804 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TnfP06804 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TnfP06804 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms