Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.13□□□□□ -0.15
PdgfrbP05622 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Gm13223-201ENSMUST00000118609 747 ntBASIC14.13□□□□□ -0.15
PdgfrbP05622 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.13□□□□□ -0.15
PdgfrbP05622 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PdgfrbP05622 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfrbP05622 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Gm33320-201ENSMUST00000192232 530 ntBASIC14.12□□□□□ -0.15
PdgfrbP05622 Gm37714-201ENSMUST00000194742 342 ntBASIC14.12□□□□□ -0.15
PdgfrbP05622 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.12□□□□□ -0.15
PdgfrbP05622 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.12□□□□□ -0.15
PdgfrbP05622 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
PdgfrbP05622 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdgfrbP05622 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm15653-201ENSMUST00000119247 907 ntBASIC14.11□□□□□ -0.15
PdgfrbP05622 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Mir6956-201ENSMUST00000183598 62 ntBASIC14.11□□□□□ -0.15
PdgfrbP05622 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm44344-201ENSMUST00000200287 129 ntBASIC14.11□□□□□ -0.15
PdgfrbP05622 Gm32390-201ENSMUST00000212713 1172 ntBASIC14.11□□□□□ -0.15
PdgfrbP05622 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.11□□□□□ -0.15
PdgfrbP05622 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdgfrbP05622 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms