Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
P04224 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
P04224 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.26□□□□□ -0.45
P04224 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.26□□□□□ -0.45
P04224 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.26□□□□□ -0.45
P04224 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
P04224 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.26□□□□□ -0.45
P04224 Ank2-226ENSMUST00000189368 339 ntBASIC12.26□□□□□ -0.45
P04224 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.26□□□□□ -0.45
P04224 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.26□□□□□ -0.45
P04224 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.25□□□□□ -0.45
P04224 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
P04224 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.25□□□□□ -0.45
P04224 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.25□□□□□ -0.45
P04224 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.25□□□□□ -0.45
P04224 Gm6376-201ENSMUST00000209407 580 ntBASIC12.25□□□□□ -0.45
P04224 Gm18246-201ENSMUST00000221023 728 ntBASIC12.25□□□□□ -0.45
P04224 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.25□□□□□ -0.45
P04224 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.25□□□□□ -0.45
P04224 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
P04224 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
P04224 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04224 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.24□□□□□ -0.45
P04224 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.24□□□□□ -0.45
P04224 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.24□□□□□ -0.45
P04224 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
P04224 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
P04224 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
P04224 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
P04224 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04224 Gm28033-201ENSMUST00000184224 96 ntBASIC12.24□□□□□ -0.45
P04224 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms