Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.68□□□□□ -0.54
CfdP03953 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CfdP03953 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.67□□□□□ -0.54
CfdP03953 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CfdP03953 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Gm16198-201ENSMUST00000118766 670 ntBASIC11.67□□□□□ -0.54
CfdP03953 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.67□□□□□ -0.54
CfdP03953 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.67□□□□□ -0.54
CfdP03953 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.67□□□□□ -0.54
CfdP03953 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CfdP03953 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CfdP03953 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.67□□□□□ -0.54
CfdP03953 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CfdP03953 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
CfdP03953 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CfdP03953 Gm12882-201ENSMUST00000121696 517 ntBASIC11.66□□□□□ -0.54
CfdP03953 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
CfdP03953 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 Gm2445-201ENSMUST00000182798 989 ntBASIC11.66□□□□□ -0.54
CfdP03953 Gm17807-201ENSMUST00000186869 298 ntBASIC11.66□□□□□ -0.54
CfdP03953 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CfdP03953 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CfdP03953 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms