Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.73□□□□□ -0.53
Hoxa3P02831 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Gm9522-201ENSMUST00000182394 926 ntBASIC11.73□□□□□ -0.53
Hoxa3P02831 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.73□□□□□ -0.53
Hoxa3P02831 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.73□□□□□ -0.53
Hoxa3P02831 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.73□□□□□ -0.53
Hoxa3P02831 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.72□□□□□ -0.53
Hoxa3P02831 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Gm20445-201ENSMUST00000061905 565 ntBASIC11.72□□□□□ -0.53
Hoxa3P02831 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hoxa3P02831 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.72□□□□□ -0.53
Hoxa3P02831 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.71□□□□□ -0.53
Hoxa3P02831 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gm5745-201ENSMUST00000183748 313 ntBASIC11.71□□□□□ -0.53
Hoxa3P02831 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gm5186-201ENSMUST00000218781 920 ntBASIC11.71□□□□□ -0.53
Hoxa3P02831 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.71□□□□□ -0.53
Hoxa3P02831 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms