Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim1O70400 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim1O70400 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.8□□□□□ -0.2
Pdlim1O70400 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Gm24420-201ENSMUST00000176676 59 ntBASIC13.8□□□□□ -0.2
Pdlim1O70400 Gm29667-201ENSMUST00000190817 490 ntBASIC13.8□□□□□ -0.2
Pdlim1O70400 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.8□□□□□ -0.2
Pdlim1O70400 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Gm20445-201ENSMUST00000061905 565 ntBASIC13.8□□□□□ -0.2
Pdlim1O70400 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim1O70400 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Syt7-204ENSMUST00000223586 1344 ntBASIC13.8□□□□□ -0.2
Pdlim1O70400 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim1O70400 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.79□□□□□ -0.2
Pdlim1O70400 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Gm13385-201ENSMUST00000121089 220 ntBASIC13.79□□□□□ -0.2
Pdlim1O70400 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Gm44719-201ENSMUST00000206404 149 ntBASIC13.79□□□□□ -0.2
Pdlim1O70400 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.79□□□□□ -0.2
Pdlim1O70400 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim1O70400 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Pdlim1O70400 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm21854-201ENSMUST00000179901 471 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm8927-201ENSMUST00000181978 981 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm9522-201ENSMUST00000182394 926 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm3222-201ENSMUST00000071282 990 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.78□□□□□ -0.2
Pdlim1O70400 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms