Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Gm5687-201ENSMUST00000118252 640 ntBASIC15.3■□□□□ 0.04
Trdmt1O55055 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Gm10156-201ENSMUST00000122364 462 ntBASIC15.3■□□□□ 0.04
Trdmt1O55055 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Gm27572-201ENSMUST00000183702 255 ntBASIC15.3■□□□□ 0.04
Trdmt1O55055 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.3■□□□□ 0.04
Trdmt1O55055 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.3■□□□□ 0.04
Trdmt1O55055 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trdmt1O55055 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.3■□□□□ 0.04
Trdmt1O55055 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Gm27331-201ENSMUST00000183705 60 ntBASIC15.29■□□□□ 0.04
Trdmt1O55055 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdmt1O55055 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.29■□□□□ 0.04
Trdmt1O55055 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.29■□□□□ 0.04
Trdmt1O55055 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.29■□□□□ 0.04
Trdmt1O55055 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdmt1O55055 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.28■□□□□ 0.04
Trdmt1O55055 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.28■□□□□ 0.04
Trdmt1O55055 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Gm8213-201ENSMUST00000118191 441 ntBASIC15.28■□□□□ 0.04
Trdmt1O55055 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.28■□□□□ 0.04
Trdmt1O55055 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms