Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm8749-201ENSMUST00000117737 331 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm12209-201ENSMUST00000120089 596 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.72□□□□□ -0.37
Dkk1O54908 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm27155-201ENSMUST00000183716 898 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm28356-202ENSMUST00000187566 858 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm18357-201ENSMUST00000188184 580 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm43841-201ENSMUST00000199491 586 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm44181-201ENSMUST00000203106 483 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Gm46136-201ENSMUST00000214730 565 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 AC131117.1-201ENSMUST00000225154 1171 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Dkk1O54908 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Dkk1O54908 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Dkk1O54908 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm25135-201ENSMUST00000082648 143 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Dkk1O54908 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Dkk1O54908 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
Dkk1O54908 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm23987-201ENSMUST00000117039 129 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm16149-201ENSMUST00000117631 309 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm13464-201ENSMUST00000119418 935 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Klra14-ps-201ENSMUST00000119532 802 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Dkk1O54908 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Dkk1O54908 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Dkk1O54908 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm17271-201ENSMUST00000165535 355 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm6223-201ENSMUST00000178436 871 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm42720-201ENSMUST00000196813 300 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm42783-201ENSMUST00000197075 795 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm43905-201ENSMUST00000204516 204 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 AC164629.1-201ENSMUST00000220250 1113 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.71□□□□□ -0.37
Dkk1O54908 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Dkk1O54908 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Dkk1O54908 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Dkk1O54908 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms