Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm2O35900 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm2O35900 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm2O35900 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm2O35900 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm2O35900 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm2O35900 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.43□□□□□ -0.42
Lsm2O35900 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.43□□□□□ -0.42
Lsm2O35900 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.43□□□□□ -0.42
Lsm2O35900 Gm7862-201ENSMUST00000121461 292 ntBASIC12.43□□□□□ -0.42
Lsm2O35900 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.43□□□□□ -0.42
Lsm2O35900 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.43□□□□□ -0.42
Lsm2O35900 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm2O35900 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm2O35900 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Lsm2O35900 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm2O35900 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm2O35900 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm2O35900 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm2O35900 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Gm15957-201ENSMUST00000118893 974 ntBASIC12.42□□□□□ -0.42
Lsm2O35900 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.42□□□□□ -0.42
Lsm2O35900 Gm5177-201ENSMUST00000183092 997 ntBASIC12.42□□□□□ -0.42
Lsm2O35900 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Gm7461-201ENSMUST00000058918 827 ntBASIC12.42□□□□□ -0.42
Lsm2O35900 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm2O35900 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Lsm2O35900 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm2O35900 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm2O35900 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm2O35900 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm2O35900 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm2O35900 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Lsm2O35900 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lsm2O35900 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Lsm2O35900 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.41□□□□□ -0.42
Lsm2O35900 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Gm9385-201ENSMUST00000117563 472 ntBASIC12.41□□□□□ -0.42
Lsm2O35900 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.41□□□□□ -0.42
Lsm2O35900 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.41□□□□□ -0.42
Lsm2O35900 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.41□□□□□ -0.42
Lsm2O35900 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm2O35900 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Gm27920-201ENSMUST00000183953 96 ntBASIC12.41□□□□□ -0.42
Lsm2O35900 Gm27301-201ENSMUST00000184012 127 ntBASIC12.41□□□□□ -0.42
Lsm2O35900 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.41□□□□□ -0.42
Lsm2O35900 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm2O35900 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm2O35900 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms