Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Matn3O35701 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Matn3O35701 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Matn3O35701 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Matn3O35701 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Gm44357-201ENSMUST00000195897 142 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm19658-201ENSMUST00000196231 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44367-201ENSMUST00000196836 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44350-201ENSMUST00000197197 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44390-201ENSMUST00000197533 144 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44313-201ENSMUST00000198018 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44486-201ENSMUST00000198508 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44314-201ENSMUST00000199263 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44394-201ENSMUST00000199558 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44484-201ENSMUST00000199873 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44466-201ENSMUST00000200264 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Gm44359-201ENSMUST00000200671 138 ntBASIC12.68□□□□□ -0.38
Matn3O35701 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.68□□□□□ -0.38
Matn3O35701 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Matn3O35701 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Matn3O35701 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Matn3O35701 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Matn3O35701 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.68□□□□□ -0.38
Matn3O35701 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Matn3O35701 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Matn3O35701 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.67□□□□□ -0.38
Matn3O35701 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.67□□□□□ -0.38
Matn3O35701 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.67□□□□□ -0.38
Matn3O35701 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.67□□□□□ -0.38
Matn3O35701 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Matn3O35701 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Matn3O35701 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Gm10060-201ENSMUST00000212002 111 ntBASIC12.67□□□□□ -0.38
Matn3O35701 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.67□□□□□ -0.38
Matn3O35701 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Matn3O35701 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Matn3O35701 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Matn3O35701 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.67□□□□□ -0.38
Matn3O35701 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Matn3O35701 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.67□□□□□ -0.38
Matn3O35701 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Matn3O35701 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Matn3O35701 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Matn3O35701 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms