Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.16□□□□□ -0.3
Cx3cl1O35188 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.16□□□□□ -0.3
Cx3cl1O35188 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Gm12151-201ENSMUST00000121374 290 ntBASIC13.15□□□□□ -0.3
Cx3cl1O35188 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.15□□□□□ -0.3
Cx3cl1O35188 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Gm3436-201ENSMUST00000179930 840 ntBASIC13.15□□□□□ -0.3
Cx3cl1O35188 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Mir8102-201ENSMUST00000184148 139 ntBASIC13.15□□□□□ -0.3
Cx3cl1O35188 Gm33320-201ENSMUST00000192232 530 ntBASIC13.15□□□□□ -0.3
Cx3cl1O35188 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.15□□□□□ -0.3
Cx3cl1O35188 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cx3cl1O35188 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cx3cl1O35188 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cx3cl1O35188 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Gm43703-201ENSMUST00000200523 763 ntBASIC13.14□□□□□ -0.31
Cx3cl1O35188 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cx3cl1O35188 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.13□□□□□ -0.31
Cx3cl1O35188 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms