Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.46□□□□□ -0.41
Alx4O35137 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.46□□□□□ -0.41
Alx4O35137 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.46□□□□□ -0.41
Alx4O35137 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Alx4O35137 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Alx4O35137 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Alx4O35137 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Alx4O35137 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Alx4O35137 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Alx4O35137 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Gm14140-201ENSMUST00000119999 995 ntBASIC12.45□□□□□ -0.42
Alx4O35137 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 AA619741-201ENSMUST00000195095 646 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.45□□□□□ -0.42
Alx4O35137 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 BC001981-202ENSMUST00000191393 1545 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Alx4O35137 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Alx4O35137 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.45□□□□□ -0.42
Alx4O35137 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Alx4O35137 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.45□□□□□ -0.42
Alx4O35137 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Alx4O35137 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Alx4O35137 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Alx4O35137 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.44□□□□□ -0.42
Alx4O35137 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Alx4O35137 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms