Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sec22bO08547 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sec22bO08547 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sec22bO08547 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sec22bO08547 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec22bO08547 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.82□□□□□ -0.2
Sec22bO08547 Gm14822-201ENSMUST00000122247 291 ntBASIC13.82□□□□□ -0.2
Sec22bO08547 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.82□□□□□ -0.2
Sec22bO08547 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.82□□□□□ -0.2
Sec22bO08547 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.82□□□□□ -0.2
Sec22bO08547 Gm24513-201ENSMUST00000174964 138 ntBASIC13.82□□□□□ -0.2
Sec22bO08547 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.82□□□□□ -0.2
Sec22bO08547 Gm27397-201ENSMUST00000184997 107 ntBASIC13.82□□□□□ -0.2
Sec22bO08547 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.82□□□□□ -0.2
Sec22bO08547 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec22bO08547 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec22bO08547 AA619741-201ENSMUST00000195095 646 ntBASIC13.82□□□□□ -0.2
Sec22bO08547 Gm2213-201ENSMUST00000197485 688 ntBASIC13.82□□□□□ -0.2
Sec22bO08547 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sec22bO08547 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec22bO08547 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sec22bO08547 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sec22bO08547 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sec22bO08547 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sec22bO08547 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec22bO08547 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sec22bO08547 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.81□□□□□ -0.2
Sec22bO08547 Gm44608-201ENSMUST00000206827 855 ntBASIC13.81□□□□□ -0.2
Sec22bO08547 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sec22bO08547 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec22bO08547 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.81□□□□□ -0.2
Sec22bO08547 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sec22bO08547 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Sec22bO08547 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sec22bO08547 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec22bO08547 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sec22bO08547 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.8□□□□□ -0.2
Sec22bO08547 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sec22bO08547 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Gm25287-201ENSMUST00000103846 110 ntBASIC13.8□□□□□ -0.2
Sec22bO08547 Gm22918-201ENSMUST00000103855 110 ntBASIC13.8□□□□□ -0.2
Sec22bO08547 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sec22bO08547 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sec22bO08547 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.8□□□□□ -0.2
Sec22bO08547 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec22bO08547 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms