Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm42872-201ENSMUST00000200026 1967 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm2824-203ENSMUST00000226189 1228 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 AC140406.1-201ENSMUST00000226481 465 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Gm17823-201ENSMUST00000217830 1006 ntBASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 n-R5s195-201ENSMUST00000082891 119 ntBASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Gm7899-201ENSMUST00000192935 1897 ntBASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcf11G3X9Z4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Gm5896-201ENSMUST00000189662 1024 ntBASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Gm44069-201ENSMUST00000204898 506 ntBASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcf11G3X9Z4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Gm9431-201ENSMUST00000119765 1051 ntBASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Gm11978-201ENSMUST00000122315 466 ntBASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Gm25927-201ENSMUST00000175058 117 ntBASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Olfr582-201ENSMUST00000098212 960 ntBASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.77■□□□□ 0.92
Pcf11G3X9Z4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC20.77■□□□□ 0.91
Pcf11G3X9Z4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Pcf11G3X9Z4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms