Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Gm18049-201ENSMUST00000208909 581 ntBASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh9F8VPK8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Gm27631-201ENSMUST00000184163 466 ntBASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Mir125a-201ENSMUST00000083545 68 ntBASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms