Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc188F6WEU2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Ccdc188F6WEU2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm8285-201ENSMUST00000208293 759 ntBASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm8385-201ENSMUST00000058999 643 ntBASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc188F6WEU2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm25951-201ENSMUST00000175330 64 ntBASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm19459-201ENSMUST00000176240 835 ntBASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm26956-201ENSMUST00000182176 986 ntBASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc188F6WEU2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms