Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc149F6V035 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Gm29741-201ENSMUST00000192667 421 ntBASIC14.15□□□□□ -0.14
Ccdc149F6V035 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Gm17794-201ENSMUST00000220252 955 ntBASIC14.15□□□□□ -0.14
Ccdc149F6V035 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.15□□□□□ -0.14
Ccdc149F6V035 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc149F6V035 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc149F6V035 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm17150-201ENSMUST00000165577 381 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm27892-201ENSMUST00000185017 106 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc149F6V035 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.14□□□□□ -0.15
Ccdc149F6V035 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc149F6V035 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.13□□□□□ -0.15
Ccdc149F6V035 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Mir698-201ENSMUST00000102164 109 ntBASIC14.13□□□□□ -0.15
Ccdc149F6V035 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Gm13829-201ENSMUST00000119600 138 ntBASIC14.13□□□□□ -0.15
Ccdc149F6V035 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.13□□□□□ -0.15
Ccdc149F6V035 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc149F6V035 Gm18062-201ENSMUST00000208020 547 ntBASIC14.13□□□□□ -0.15
Ccdc149F6V035 Gm18055-201ENSMUST00000208254 547 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms