Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm12628-201ENSMUST00000122193 382 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm34023-201ENSMUST00000195539 217 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm45856-201ENSMUST00000212752 416 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Gm19163-201ENSMUST00000223313 780 ntBASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Gm24447-201ENSMUST00000083977 338 ntBASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a3E9PWQ3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm37666-201ENSMUST00000194110 866 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm22138-201ENSMUST00000158748 128 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm25072-201ENSMUST00000175233 235 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm9726-201ENSMUST00000180321 678 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm5340-201ENSMUST00000203733 880 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm45433-201ENSMUST00000209386 247 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a3E9PWQ3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gm42511-201ENSMUST00000196160 234 ntBASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms