Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Gm22331-201ENSMUST00000158066 136 ntBASIC12.51□□□□□ -0.41
Shank1D3YZU1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Mir3547-201ENSMUST00000175461 88 ntBASIC12.51□□□□□ -0.41
Shank1D3YZU1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.51□□□□□ -0.41
Shank1D3YZU1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.51□□□□□ -0.41
Shank1D3YZU1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.51□□□□□ -0.41
Shank1D3YZU1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shank1D3YZU1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.5□□□□□ -0.41
Shank1D3YZU1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.5□□□□□ -0.41
Shank1D3YZU1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shank1D3YZU1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Acot6-202ENSMUST00000222921 3622 ntBASIC12.49□□□□□ -0.41
Shank1D3YZU1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.49□□□□□ -0.41
Shank1D3YZU1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.49□□□□□ -0.41
Shank1D3YZU1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm27243-201ENSMUST00000183964 521 ntBASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shank1D3YZU1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms