Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Gm13342-201ENSMUST00000121055 207 ntBASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Gm6621-201ENSMUST00000193251 772 ntBASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.64■□□□□ 0.41
Scn7aB1AYL1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Gm5781-201ENSMUST00000219792 443 ntBASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn7aB1AYL1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Gm22121-201ENSMUST00000175148 54 ntBASIC17.63■□□□□ 0.41
Scn7aB1AYL1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn7aB1AYL1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Gm24548-201ENSMUST00000158650 108 ntBASIC17.62■□□□□ 0.41
Scn7aB1AYL1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn7aB1AYL1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm12241-201ENSMUST00000118330 726 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm18935-201ENSMUST00000212692 664 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm22323-201ENSMUST00000103832 109 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms