Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gm12887B1AVM1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm12887B1AVM1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms