Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Efs-202ENSMUST00000227037 2540 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.77□□□□□ -0.52
Col6a4A2AX52 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a4A2AX52 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.77□□□□□ -0.53
Col6a4A2AX52 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm18056-201ENSMUST00000207670 568 ntBASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm18061-201ENSMUST00000208350 562 ntBASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm18063-201ENSMUST00000208529 568 ntBASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm18052-201ENSMUST00000208750 559 ntBASIC11.77□□□□□ -0.53
Col6a4A2AX52 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.77□□□□□ -0.53
Col6a4A2AX52 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a4A2AX52 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.76□□□□□ -0.53
Col6a4A2AX52 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.76□□□□□ -0.53
Col6a4A2AX52 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms