Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Gm37230-201ENSMUST00000194491 818 ntBASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Gm18062-201ENSMUST00000208020 547 ntBASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Gm18055-201ENSMUST00000208254 547 ntBASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap99A0A140LIX9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Gm19220-201ENSMUST00000222682 803 ntBASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cfap99A0A140LIX9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cfap99A0A140LIX9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cfap99A0A140LIX9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Gm12585-201ENSMUST00000117307 290 ntBASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Gm15824-201ENSMUST00000119516 955 ntBASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.7■□□□□ 0.26
Cfap99A0A140LIX9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Gm13829-201ENSMUST00000119600 138 ntBASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cfap99A0A140LIX9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms