Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 AA619741-201ENSMUST00000195095 646 ntBASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Gm44771-201ENSMUST00000206975 626 ntBASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc194A0A140LIT1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 AA543401-201ENSMUST00000164248 1269 ntBASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc194A0A140LIT1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc194A0A140LIT1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm6443-201ENSMUST00000203599 874 ntBASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm18049-201ENSMUST00000208909 581 ntBASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc194A0A140LIT1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms