Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.46□□□□□ -0.58
Trav18A0A075B656 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.45□□□□□ -0.58
Trav18A0A075B656 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.45□□□□□ -0.58
Trav18A0A075B656 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm15957-201ENSMUST00000118893 974 ntBASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm45612-201ENSMUST00000211320 160 ntBASIC11.45□□□□□ -0.58
Trav18A0A075B656 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.45□□□□□ -0.58
Trav18A0A075B656 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gm10175-201ENSMUST00000086013 645 ntBASIC11.45□□□□□ -0.58
Trav18A0A075B656 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav18A0A075B656 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gm15467-201ENSMUST00000120582 445 ntBASIC11.44□□□□□ -0.58
Trav18A0A075B656 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gm38225-201ENSMUST00000194001 393 ntBASIC11.44□□□□□ -0.58
Trav18A0A075B656 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.44□□□□□ -0.58
Trav18A0A075B656 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.44□□□□□ -0.58
Trav18A0A075B656 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.44□□□□□ -0.58
Trav18A0A075B656 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav18A0A075B656 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms