Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcf1Q9QZM3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcf1Q9QZM3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcf1Q9QZM3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcf1Q9QZM3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcf1Q9QZM3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcf1Q9QZM3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clcf1Q9QZM3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcf1Q9QZM3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcf1Q9QZM3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Clcf1Q9QZM3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcf1Q9QZM3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.58■□□□□ 0.72
Clcf1Q9QZM3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clcf1Q9QZM3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clcf1Q9QZM3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcf1Q9QZM3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clcf1Q9QZM3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcf1Q9QZM3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcf1Q9QZM3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcf1Q9QZM3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clcf1Q9QZM3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcf1Q9QZM3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcf1Q9QZM3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clcf1Q9QZM3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Clcf1Q9QZM3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcf1Q9QZM3 Gm5812-201ENSMUST00000061073 957 ntBASIC19.52■□□□□ 0.72
Clcf1Q9QZM3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcf1Q9QZM3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcf1Q9QZM3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.52■□□□□ 0.71
Clcf1Q9QZM3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clcf1Q9QZM3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.51■□□□□ 0.71
Clcf1Q9QZM3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcf1Q9QZM3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.5■□□□□ 0.71
Clcf1Q9QZM3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Clcf1Q9QZM3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Clcf1Q9QZM3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms