Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Shroom3Q9QXN0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Shroom3Q9QXN0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Shroom3Q9QXN0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.95■■□□□ 1.1
Shroom3Q9QXN0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.95■■□□□ 1.1
Shroom3Q9QXN0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Shroom3Q9QXN0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Shroom3Q9QXN0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Shroom3Q9QXN0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shroom3Q9QXN0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom3Q9QXN0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom3Q9QXN0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom3Q9QXN0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shroom3Q9QXN0 Gm43566-201ENSMUST00000196851 808 ntBASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shroom3Q9QXN0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom3Q9QXN0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Shroom3Q9QXN0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom3Q9QXN0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom3Q9QXN0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shroom3Q9QXN0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Shroom3Q9QXN0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
Shroom3Q9QXN0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Shroom3Q9QXN0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.89■■□□□ 1.1
Shroom3Q9QXN0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Shroom3Q9QXN0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.89■■□□□ 1.09
Shroom3Q9QXN0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Shroom3Q9QXN0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom3Q9QXN0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom3Q9QXN0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom3Q9QXN0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shroom3Q9QXN0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom3Q9QXN0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Shroom3Q9QXN0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom3Q9QXN0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom3Q9QXN0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shroom3Q9QXN0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shroom3Q9QXN0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom3Q9QXN0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.86■■□□□ 1.09
Shroom3Q9QXN0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom3Q9QXN0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shroom3Q9QXN0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Gm15039-201ENSMUST00000118914 875 ntBASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shroom3Q9QXN0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom3Q9QXN0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom3Q9QXN0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom3Q9QXN0 Gm13238-201ENSMUST00000117655 780 ntBASIC21.84■■□□□ 1.09
Shroom3Q9QXN0 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.84■■□□□ 1.09
Shroom3Q9QXN0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shroom3Q9QXN0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shroom3Q9QXN0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Shroom3Q9QXN0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shroom3Q9QXN0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shroom3Q9QXN0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Shroom3Q9QXN0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shroom3Q9QXN0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms