Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc3Q9CW03 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc3Q9CW03 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Smc3Q9CW03 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Smc3Q9CW03 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Smc3Q9CW03 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.54■■□□□ 1.68
Smc3Q9CW03 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Smc3Q9CW03 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Smc3Q9CW03 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc3Q9CW03 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc3Q9CW03 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc3Q9CW03 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.52■■□□□ 1.68
Smc3Q9CW03 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Smc3Q9CW03 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Smc3Q9CW03 Gm6311-201ENSMUST00000073790 878 ntBASIC25.51■■□□□ 1.67
Smc3Q9CW03 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc3Q9CW03 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Smc3Q9CW03 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.5■■□□□ 1.67
Smc3Q9CW03 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.5■■□□□ 1.67
Smc3Q9CW03 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc3Q9CW03 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Smc3Q9CW03 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Smc3Q9CW03 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc3Q9CW03 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Smc3Q9CW03 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc3Q9CW03 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc3Q9CW03 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Smc3Q9CW03 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc3Q9CW03 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.47■■□□□ 1.67
Smc3Q9CW03 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc3Q9CW03 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.47■■□□□ 1.67
Smc3Q9CW03 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Smc3Q9CW03 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.47■■□□□ 1.67
Smc3Q9CW03 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.46■■□□□ 1.67
Smc3Q9CW03 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Smc3Q9CW03 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.46■■□□□ 1.67
Smc3Q9CW03 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Smc3Q9CW03 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Smc3Q9CW03 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Smc3Q9CW03 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Smc3Q9CW03 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc3Q9CW03 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc3Q9CW03 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Smc3Q9CW03 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.45■■□□□ 1.66
Smc3Q9CW03 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Smc3Q9CW03 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
Smc3Q9CW03 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc3Q9CW03 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Smc3Q9CW03 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
Smc3Q9CW03 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Smc3Q9CW03 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc3Q9CW03 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc3Q9CW03 Gm44428-201ENSMUST00000204474 874 ntBASIC25.42■■□□□ 1.66
Smc3Q9CW03 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Smc3Q9CW03 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Smc3Q9CW03 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.41■■□□□ 1.66
Smc3Q9CW03 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.41■■□□□ 1.66
Smc3Q9CW03 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.41■■□□□ 1.66
Smc3Q9CW03 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.41■■□□□ 1.66
Smc3Q9CW03 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc3Q9CW03 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.41■■□□□ 1.66
Smc3Q9CW03 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc3Q9CW03 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Smc3Q9CW03 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc3Q9CW03 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Smc3Q9CW03 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc3Q9CW03 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms