Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cstf1Q99LC2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.82■■□□□ 1.08
Cstf1Q99LC2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cstf1Q99LC2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.82■■□□□ 1.08
Cstf1Q99LC2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cstf1Q99LC2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cstf1Q99LC2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.81■■□□□ 1.08
Cstf1Q99LC2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cstf1Q99LC2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cstf1Q99LC2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cstf1Q99LC2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cstf1Q99LC2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cstf1Q99LC2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.79■■□□□ 1.08
Cstf1Q99LC2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cstf1Q99LC2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.78■■□□□ 1.08
Cstf1Q99LC2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.78■■□□□ 1.08
Cstf1Q99LC2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cstf1Q99LC2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cstf1Q99LC2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cstf1Q99LC2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cstf1Q99LC2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.76■■□□□ 1.07
Cstf1Q99LC2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cstf1Q99LC2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.75■■□□□ 1.07
Cstf1Q99LC2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cstf1Q99LC2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cstf1Q99LC2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.74■■□□□ 1.07
Cstf1Q99LC2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cstf1Q99LC2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cstf1Q99LC2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cstf1Q99LC2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cstf1Q99LC2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cstf1Q99LC2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.73■■□□□ 1.07
Cstf1Q99LC2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cstf1Q99LC2 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.73■■□□□ 1.07
Cstf1Q99LC2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cstf1Q99LC2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Cstf1Q99LC2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.72■■□□□ 1.07
Cstf1Q99LC2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cstf1Q99LC2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cstf1Q99LC2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cstf1Q99LC2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Gm12922-201ENSMUST00000120626 809 ntBASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cstf1Q99LC2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cstf1Q99LC2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cstf1Q99LC2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Cstf1Q99LC2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cstf1Q99LC2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cstf1Q99LC2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Cstf1Q99LC2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.69■■□□□ 1.06
Cstf1Q99LC2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.69■■□□□ 1.06
Cstf1Q99LC2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cstf1Q99LC2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cstf1Q99LC2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.68■■□□□ 1.06
Cstf1Q99LC2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cstf1Q99LC2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cstf1Q99LC2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cstf1Q99LC2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cstf1Q99LC2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cstf1Q99LC2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.67■■□□□ 1.06
Cstf1Q99LC2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cstf1Q99LC2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cstf1Q99LC2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cstf1Q99LC2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.64■■□□□ 1.05
Cstf1Q99LC2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.64■■□□□ 1.05
Cstf1Q99LC2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms