Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rfc4Q99J62 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Rfc4Q99J62 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rfc4Q99J62 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 Gm13241-201ENSMUST00000094493 780 ntBASIC25.31■■□□□ 1.64
Rfc4Q99J62 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rfc4Q99J62 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Rfc4Q99J62 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Rfc4Q99J62 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rfc4Q99J62 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rfc4Q99J62 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rfc4Q99J62 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rfc4Q99J62 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rfc4Q99J62 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rfc4Q99J62 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rfc4Q99J62 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
Rfc4Q99J62 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Rfc4Q99J62 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rfc4Q99J62 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rfc4Q99J62 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rfc4Q99J62 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Rfc4Q99J62 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.26■■□□□ 1.63
Rfc4Q99J62 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.26■■□□□ 1.63
Rfc4Q99J62 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.26■■□□□ 1.63
Rfc4Q99J62 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.26■■□□□ 1.63
Rfc4Q99J62 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rfc4Q99J62 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.25■■□□□ 1.63
Rfc4Q99J62 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rfc4Q99J62 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.25■■□□□ 1.63
Rfc4Q99J62 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Rfc4Q99J62 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rfc4Q99J62 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.24■■□□□ 1.63
Rfc4Q99J62 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.24■■□□□ 1.63
Rfc4Q99J62 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.24■■□□□ 1.63
Rfc4Q99J62 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Rfc4Q99J62 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rfc4Q99J62 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc4Q99J62 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Rfc4Q99J62 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.22■■□□□ 1.63
Rfc4Q99J62 Gm9847-201ENSMUST00000052528 599 ntBASIC25.22■■□□□ 1.63
Rfc4Q99J62 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Rfc4Q99J62 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc4Q99J62 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Rfc4Q99J62 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Rfc4Q99J62 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.2■■□□□ 1.62
Rfc4Q99J62 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rfc4Q99J62 Gm40881-201ENSMUST00000223397 166 ntBASIC25.2■■□□□ 1.62
Rfc4Q99J62 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rfc4Q99J62 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rfc4Q99J62 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rfc4Q99J62 Gm22238-201ENSMUST00000175222 88 ntBASIC25.19■■□□□ 1.62
Rfc4Q99J62 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.19■■□□□ 1.62
Rfc4Q99J62 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.18■■□□□ 1.62
Rfc4Q99J62 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.18■■□□□ 1.62
Rfc4Q99J62 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rfc4Q99J62 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rfc4Q99J62 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rfc4Q99J62 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Rfc4Q99J62 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rfc4Q99J62 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rfc4Q99J62 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rfc4Q99J62 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rfc4Q99J62 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms