Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhac1Q91Y10 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhac1Q91Y10 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac1Q91Y10 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pcdhac1Q91Y10 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhac1Q91Y10 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 Scarna2-201ENSMUST00000157560 414 ntBASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 Gm9806-201ENSMUST00000051080 552 ntBASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhac1Q91Y10 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhac1Q91Y10 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhac1Q91Y10 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.18■□□□□ 0.82
Pcdhac1Q91Y10 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhac1Q91Y10 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhac1Q91Y10 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhac1Q91Y10 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhac1Q91Y10 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhac1Q91Y10 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.17■□□□□ 0.82
Pcdhac1Q91Y10 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhac1Q91Y10 Gm11687-201ENSMUST00000118911 886 ntBASIC20.17■□□□□ 0.82
Pcdhac1Q91Y10 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhac1Q91Y10 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhac1Q91Y10 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhac1Q91Y10 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhac1Q91Y10 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhac1Q91Y10 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhac1Q91Y10 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhac1Q91Y10 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhac1Q91Y10 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhac1Q91Y10 Gm16437-201ENSMUST00000025669 507 ntBASIC20.15■□□□□ 0.82
Pcdhac1Q91Y10 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhac1Q91Y10 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhac1Q91Y10 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhac1Q91Y10 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Gm11175-201ENSMUST00000116172 543 ntBASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhac1Q91Y10 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhac1Q91Y10 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhac1Q91Y10 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhac1Q91Y10 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhac1Q91Y10 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhac1Q91Y10 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhac1Q91Y10 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhac1Q91Y10 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhac1Q91Y10 Mir6538-201ENSMUST00000183713 110 ntBASIC20.1■□□□□ 0.81
Pcdhac1Q91Y10 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms